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hive报lzo Premature EOF from inputStream错误

今天dw组同事发邮件说有一个问题让帮解决一下,他们自己没能搞得定,以下问题解决过程:

1、hql

insert overwrite table mds_prod_silent_atten_user partition (dt=20141110) select uid, host, atten_time from (select uid, host, atten_time from (select case when t2.uid is null then t1.uid else t2.uid end uid, case when t2.uid is null and t2.host is null then t1.host else t2.host end host, case when t2.atten_time is null or t1.atten_time > t2.atten_time then t1.atten_time else t2.atten_time end atten_time from (select uid, findid(extend,'uids') host, dt atten_time, sum(case when (mode = '1' or mode = '3') then 1 else -1 end) num from ods_bhv_tblog where behavior = '14000076' and dt = '20141115' and (mode = '1' or mode = '3' or mode = '2') and status = '1' group by uid,findid(extend,'uids'),dt) t1 full outer join (select uid, attened_uid host, atten_time from mds_prod_silent_atten_user where dt='20141114') t2 on t1.uid = t2.uid and t1.host = t2.host where t1.uid is null or t1.num > 0) t3 union all select t5.uid, t5.host, t5.atten_time from (select uid, host, atten_time from (select uid, findid(extend,'uids') host, dt atten_time, sum(case when (mode = '1' or mode = '3') then 1 else -1 end) num from ods_bhv_tblog where behavior = '14000076' and dt = '20141115' and (mode = '1' or mode = '3' or mode = '2') and status = '1' group by uid,findid(extend,'uids'),dt) t4 where num = 0) t5 join (select uid, attened_uid host, atten_time from mds_prod_silent_atten_user where dt='20141114') t6 on t6.uid = t5.uid and t6.host = t5.host) t7


以上是具体出错的hql,看着很复杂,其实逻辑比较简单,只涉及到两个表的关联:mds_prod_silent_atten_user和ods_bhv_tblog。

2、报错日志:

Error: java.io.IOException: java.lang.reflect.InvocationTargetException
	at org.apache.hadoop.hive.io.HiveIOExceptionHandlerChain.handleRecordReaderCreationException(HiveIOExceptionHandlerChain.java:97)
	at org.apache.hadoop.hive.io.HiveIOExceptionHandlerUtil.handleRecordReaderCreationException(HiveIOExceptionHandlerUtil.java:57)
	at org.apache.hadoop.hive.shims.HadoopShimsSecure$CombineFileRecordReader.initNextRecordReader(HadoopShimsSecure.java:302)
	at org.apache.hadoop.hive.shims.HadoopShimsSecure$CombineFileRecordReader.<init>(HadoopShimsSecure.java:249)
	at org.apache.hadoop.hive.shims.HadoopShimsSecure$CombineFileInputFormatShim.getRecordReader(HadoopShimsSecure.java:363)
	at org.apache.hadoop.hive.ql.io.CombineHiveInputFormat.getRecordReader(CombineHiveInputFormat.java:591)
	at org.apache.hadoop.mapred.MapTask$TrackedRecordReader.<init>(MapTask.java:168)
	at org.apache.hadoop.mapred.MapTask.runOldMapper(MapTask.java:409)
	at org.apache.hadoop.mapred.MapTask.run(MapTask.java:342)
	at org.apache.hadoop.mapred.YarnChild$2.run(YarnChild.java:167)
	at java.security.AccessController.doPrivileged(Native Method)
	at javax.security.auth.Subject.doAs(Subject.java:396)
	at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1550)
	at org.apache.hadoop.mapred.YarnChild.main(YarnChild.java:162)
Caused by: java.lang.reflect.InvocationTargetException
	at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
	at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39)
	at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27)
	at java.lang.reflect.Constructor.newInstance(Constructor.java:513)
	at org.apache.hadoop.hive.shims.HadoopShimsSecure$CombineFileRecordReader.initNextRecordReader(HadoopShimsSecure.java:288)
	... 11 more
Caused by: java.io.EOFException: Premature EOF from inputStream
	at com.hadoop.compression.lzo.LzopInputStream.readFully(LzopInputStream.java:75)
	at com.hadoop.compression.lzo.LzopInputStream.readHeader(LzopInputStream.java:114)
	at com.hadoop.compression.lzo.LzopInputStream.<init>(LzopInputStream.java:54)
	at com.hadoop.compression.lzo.LzopCodec.createInputStream(LzopCodec.java:83)
	at org.apache.hadoop.hive.ql.io.RCFile$ValueBuffer.<init>(RCFile.java:667)
	at org.apache.hadoop.hive.ql.io.RCFile$Reader.<init>(RCFile.java:1431)
	at org.apache.hadoop.hive.ql.io.RCFile$Reader.<init>(RCFile.java:1342)
	at org.apache.hadoop.hive.ql.io.rcfile.merge.RCFileBlockMergeRecordReader.<init>(RCFileBlockMergeRecordReader.java:46)
	at org.apache.hadoop.hive.ql.io.rcfile.merge.RCFileBlockMergeInputFormat.getRecordReader(RCFileBlockMergeInputFormat.java:38)
	at org.apache.hadoop.hive.ql.io.CombineHiveRecordReader.<init>(CombineHiveRecordReader.java:65)
	... 16 more

日志显示,在使用LZO进行压缩时出现Premature EOF from inputStream错误,该错误出现在stage-3

3、stage-3的执行计划信息如下:

Stage: Stage-3
    Map Reduce
      Map Operator Tree:
          TableScan
            Union
              Statistics: Num rows: 365 Data size: 146323 Basic stats: COMPLETE Column stats: NONE
              Select Operator
                expressions: _col0 (type: string), _col1 (type: string), _col2 (type: string)
                outputColumnNames: _col0, _col1, _col2
                Statistics: Num rows: 365 Data size: 146323 Basic stats: COMPLETE Column stats: NONE
                File Output Operator
                  compressed: false
                  Statistics: Num rows: 365 Data size: 146323 Basic stats: COMPLETE Column stats: NONE
                  table:
                      input format: org.apache.hadoop.hive.ql.io.RCFileInputFormat
                      output format: org.apache.hadoop.hive.ql.io.RCFileOutputFormat
                      serde: org.apache.hadoop.hive.serde2.columnar.LazyBinaryColumnarSerDe
                      name: default.mds_prod_silent_atten_user
          TableScan
            Union
              Statistics: Num rows: 365 Data size: 146323 Basic stats: COMPLETE Column stats: NONE
              Select Operator
                expressions: _col0 (type: string), _col1 (type: string), _col2 (type: string)
                outputColumnNames: _col0, _col1, _col2
                Statistics: Num rows: 365 Data size: 146323 Basic stats: COMPLETE Column stats: NONE
                File Output Operator
                  compressed: false
                  Statistics: Num rows: 365 Data size: 146323 Basic stats: COMPLETE Column stats: NONE
                  table:
                      input format: org.apache.hadoop.hive.ql.io.RCFileInputFormat
                      output format: org.apache.hadoop.hive.ql.io.RCFileOutputFormat
                      serde: org.apache.hadoop.hive.serde2.columnar.LazyBinaryColumnarSerDe
                      name: default.mds_prod_silent_atten_user

stage-3只有map,没有reduce,而且map阶段只是简单的进行union,看不错有什么特殊的地方。

4、问题查找

根据lzo Premature EOF from inputStream错误信息google了一把,果然有人遇到过类似的问题,链接:

http://www.cnblogs.com/aprilrain/archive/2013/03/06/2946326.html

问题原因:

如果输出格式是TextOutputFormat,要用LzopCodec,相应的读取这个输出的格式是LzoTextInputFormat。

如果输出格式用SequenceFileOutputFormat,要用LzoCodec,相应的读取这个输出的格式是SequenceFileInputFormat。

如果输出使用SequenceFile配上LzopCodec的话,那就等着用SequenceFileInputFormat读取这个输出时收到“java.io.EOFException: Premature EOF from inputStream”吧。


以上链接对应的描述和我们这个问题有类似情况,我们的表输出格式是RCFileOutputFormat,不是普通文本,压缩编码不能用LzopCodec,应该用LzoCodec,而报错信息印证了这一点,在读取上一个job采用LzopCodec压缩生成的rcfile文件时报错。

既然找到了问题的原因,那下一步就是找对应的参数,这个参数应该是控制reduce输出压缩编码的参数,将其对应的lzo压缩编码换成LzoCodec,根据出问题job的配置信息:



果然,mapreduce.output.fileoutputformat.compress.codec选项被设置成了LzopCodec,将该选项修改mapreduce.output.fileoutputformat.compress.codec的值就行了,修改成org.apache.hadoop.io.compress.DefaultCodec,默认使用LzoCodec。



hive报lzo Premature EOF from inputStream错误