package single;

import java.io.BufferedReader;
import java.io.BufferedWriter;
import java.io.FileReader;
import java.io.FileWriter;

public class Elm_site {
    // 从Elm中获得位点 每一行是一个蛋白质的的位点
    public void get_site(String path) {
        try {
            FileReader reader = new FileReader(path);
            BufferedReader br = new BufferedReader(reader);
            String str=null;
            String now="O00115";
            FileWriter fileWritter = new FileWriter("E:\\experiment--help\\linglingbao\\site.txt");
            BufferedWriter bufferWritter = new BufferedWriter(fileWritter);

            while((str=br.readLine())!=null){
                String[] temp =str.split("    ");//每一列之间使用TAB隔开的，需要用TAB来截取
                String uni_id=temp[1];
                if(uni_id.equals(now)){
                    System.out.print(temp[2]+" ");//输出
                    bufferWritter.write(temp[2]+" ");//写入文件
                    bufferWritter.flush();
                }else{
                    now=uni_id;
                    System.out.print("\n"+temp[2]+" ");
                    bufferWritter.write("\n"+temp[2]+" ");
                    bufferWritter.flush();
                }
            }
            br.close();
            reader.close();
        } catch (Exception e) {
            // TODO Auto-generated catch block
            e.printStackTrace();
        }
    }
    public static void main(String[] args) {
        Elm_site site = new Elm_site();
        String path = "E:\\experiment--help\\linglingbao\\ubiquitination.txt";
        site.get_site(path);
    }
}